BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008C07SP1|AL425833
(776 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig622 1514 0.0
>3x_Contig622
Length = 1958
Score = 1514 bits (760), Expect = 0.0
Identities = 769/776 (99%)
Strand = Plus / Plus
Query: 1 gatcttaattctatmctgcgattcgatctctttcaatttgggtctttcctccttcgtgat 60
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 gatcttaattctatagtgcgattcgatctctttcaatttgggtctttcctccttcgtgat 168
Query: 61 gaaatttattgcaacacctttacgtccaaaccgtccggatctaccaatacgatggatata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 gaaatttattgcaacacctttacgtccaaaccgtccggatctaccaatacgatggatata 228
Query: 121 gttctctagattatctggtatatcgtagtttatcaccaatgagatctgctggamatcgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 229 gttctctagattatctggtatatcgtagtttatcaccaatgagatctgctggacatcgat 288
Query: 181 accacgagcccacacgtctgtbgatattagcaccctggcttttccactcctgaaatcatt 240
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 289 accacgagcccacacgtctgtcgatattagcaccctggcttttccactcctgaaatcatt 348
Query: 241 catcacttgatcacgttcttcctgtttcatgtcaccgtgcattgaggacacagagaaatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 catcacttgatcacgttcttcctgtttcatgtcaccgtgcattgaggacacagagaaatt 408
Query: 301 cgtctgtgtcaacttcctggataaccaatccacttttttccttgtattamagaatatcac 360
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 409 cgtctgtgtcaacttcctggataaccaatccacttttttccttgtattacagaatatcac 468
Query: 361 amattgtgttatcgttaacgaatcgtatagatcacagagtgtatcaaacttccattcttc 420
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 acattgtgttatcgttaacgaatcgtatagatcacagagtgtatcaaacttccattcttc 528
Query: 421 cttttctacatccacataatattgctttatcacgtccaaggatatctcatcccgcttaac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 cttttctacatccacataatattgctttatcacgtccaaggatatctcatcccgcttaac 588
Query: 481 caatatcttcaccgggtcactcatgaacttcttggtgatctctaatatatstttactcat 540
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 589 caatatcttcaccgggtcactcatgaacttcttggtgatctctaatatatctttactcat 648
Query: 541 tgtagcacttaccaccacgacttgaatcgtcggtggtaacttggtgaaaatgtcgtagat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 tgtagcacttaccaccacgacttgaatcgtcggtggtaacttggtgaaaatgtcgtagat 708
Query: 601 ttgttgtttaaaccccaaagtttctccgagtagttcatctgcttcatcgagaactaagat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 ttgttgtttaaaccccaaagtttctccgagtagttcatctgcttcatcgagaactaagat 768
Query: 661 cttacagtttctaacgttcaatacttgtctcttgatcatatctagtacacggcccggtgt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 cttacagtttctaacgttcaatacttgtctcttgatcatatctagtacacggcccggtgt 828
Query: 721 accactgaccacttgacaatttttcgatactttcttgatatcttgttgtaaggcct 776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 829 accactgaccacttgacaatttttcgatactttcttgatatcttgttgtaaggcct 884
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5105
Number of Sequences: 1807
Number of extensions: 5105
Number of successful extensions: 31
Number of sequences better than 1.0e-20: 1
length of query: 776
length of database: 10,358,551
effective HSP length: 16
effective length of query: 760
effective length of database: 10,329,639
effective search space: 7850525640
effective search space used: 7850525640
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)